Notes
- 127 Drafted players in the history of the Cougar Baseball program
- 22 Major League players
- Houston Baseball has had someone drafted the last 14 of 15 years
- 3 First Round Selections

• 1. Brad Lincoln (2006 National Player of the Year) - Pittsburgh (1st Rd. at No. 4 overall) in 2006
  
• 2. Ryan Wagner – Cincinnati Reds (1st Rd. at No. 14 overall) in 2003
  
• 3. Brad Sullivan – Oakland A's (1st Rd. at No. 25 overall) in 2003

Complete List of Players